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SRX18138511: Manacus RADseq Library 4
1 ILLUMINA (Illumina NovaSeq 6000) run: 3.7M spots, 1.1G bases, 341.8Mb downloads

Design: Single digest RADseq with SbfI, Etter et al. 2011 protocol
Submitted by: University of Illinois Urbana-Champaign
Study: Manacus hybrid zone RADseq
show Abstracthide Abstract
We investigated the stability of a well-studied hybrid zone in Bocas del Toro, Panama involving the golden-collared manakin (Manacus vitellinus) and the white-collared manakin (Manacus candei), two tropical bird species with lek breeding behavior. Given previously documented female preference for golden male collar color and the strength of sexual selection in this system, we hypothesized that male secondary sexual traits in this hybrid zone would move northwestward toward candei over time. We resampled the hybrid zone ~25 years after initial surveys to assess its temporal stability. A genomic hybrid index based on thousands of SNPs showed that the geographic location of the genomic transition between these species has remained stable.
Sample: Parental M. vitellinus Rambala 545
SAMN31537573 • SRS15640265 • All experiments • All runs
Library:
Name: 545
Instrument: Illumina NovaSeq 6000
Strategy: RAD-Seq
Source: GENOMIC
Selection: Reduced Representation
Layout: PAIRED
Runs: 1 run, 3.7M spots, 1.1G bases, 341.8Mb
Run# of Spots# of BasesSizePublished
SRR221581683,651,8211.1G341.8Mb2023-05-26

ID:
25114763

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